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- Graduate School of Education (Master's Course, Professional Degree Course)
- Graduate School of Humanities and Social Sciences (Master's Course) (Doctor's Course)
- Graduate School of Natural Science and Technology (Master's Course) (Doctor's Course)
- Graduate School of Health Sciences (Master's Course) (Doctor's Course)
- Graduate School of Environmental Science (Master's Course) (Doctor's Course)
- Graduate School of Medicine Dentistry and Pharmaceutical Sciences (Master's Course) (Doctor's Course)
- School of Law (Professional Degree Course)
- Joint Graduate School in Science of School Education, Hyogo University of Teacher Education (Doctor's Course)
- Research Institute
- Nationwide Joint-use Facility